Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941952.1_cds_XP_016485626.1_76537
CDS Infomation

[gene=LOC107806027] [db_xref=GeneID:107806027] [protein=pectinesterase-like] [protein_id=XP_016485626.1] [location=complement(join(32852..33552,33929..34397,34445..34915))] [gbkey=CDS]
Sequence

ATGGGGGTGAAGAAACTAGCTATTGCTAGTGTTGCTTCAATTCTTCTAGTGGCTTGTGTG
GTGGCTGCAGCCATCTCATTTACCAAGAAGAATGAAGATAAGTCATCAAATTCTACTGAT
TCTCGTCTTTCAACTTCTACTAAGTCTGTCCAAGCTATTTGCCAACCCACTGATTACAAA
GAAACTTGTGAAAAAAGTCTTGCCAATGCTAAAAACATCAACGATCCGAAAGAACTTATT
AAAGTGGCGTTTAACGCCACAATCAACGATCTCTCTGACGTTATAAAAAATTCTGCCTCA
TTAATCGATGAAGCTAAAAAAGATCCTAGGACAAAAGACGCGTTACAAACGTGCCAAGGT
CTTGTTGATGTTGCAATTGATGATCTTACGAGGTCTTTTGACAAATTCGACAAATTTGAG
GTCAGTAAAATCAAGGATTATACCGATGACCTAAAAACGTGGCTCAGTAGCGCCATTACT
TATCAAGAAACATGTTTGGACGCTTTTGAGAACACGACTGGTGATACTGGTGAGAAAATG
AAAAAACTTTTGAAAAATGCAGGGGAACTCACGAGCAATGGTTTAGCTATGGTTTCGAGT
TTTGGTGAAGTTGTAGCCAACTTGAATATCCCTGGTGTAAACCGACGATTATTAGACGCC
CACGAAAGGATGCTCTCTGATTCCCTTAAGCCAAATGTTGTAGTTGCAATTGATGGAAGT
GGACAATATAAGAGTATAAATGAGGCACTTAATGCTGTTCCTAAAATGAATACTCAAAGA
TATGTCATTTTTATCAAGGCTGGTGTATACAATGAGCATGTTGAAATTCCAAGGAAAATG
AACAACATTGTATTTATTGGTGAAGGCCCAACCAAGACTAAAATTACTGGTAGCTTGAAC
TATGCTGATGGCACTGGCACTTTTAAAACCGCCACATTTGCTGTCAATGGAGATTATTTC
ATGGCTAAAGATATCGGATTCGAGAACACAGCAGGACCAGTGAAGCACCAAGCCGTAGCA
CTTCGTGTCTCAGGCGATATGGCCATTTTCCACAACTGTCAAATCGATGGTTATCAAGAC
ACACTATACGTCCACTCCTATCGCCAATTCTTCCGCGACTGCACCATTACAGGAACCATA
GATTTCATCTTTGGTGACGCTGCAGCCGTTTTCCAAAACTGCAAAATGATAGTAAGAAAA
CCAATGGATAATCAAGCTTGCATGGTAACAGCACAAGGCAGAAAAGATCATCGGGGAGTC
GGTGGAATAGTCATGCAAAATTGTCAAATAAAGGCCGAACAAGGTTTTCTTGCTGCTCAA
CCACCAATTAAAGCATATTTAGGACGACCATGGAAAGAATTTTCAAGAACAATAATTATG
CAATCTGAAATTGATGGGTTTATTGCACCAGAAGGATGGTCACCTTGGGTTGGTAATTTT
GCACTTGACACTTTGTTTTATGCTGAGTATCAAAATAGAGGTCCAGGATCAATTACATAT
AGTAGGGTTAATTGGAAAGGTTACCAAAAGACAATTGCACCTCAGGTTGCTGCACAATTT
ACTCCTGGTGTGTTTATTATGGGTGATGAATGGGTTAAGTTGAGTGGGGTACCATATGAA
CCTGGCATGATTAGGGTTTAA

Peptide Sequence

PEP ID

XP_016485626.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MGVKKLAIASVASILLVACVVAAAISFTKKNEDKSSNSTDSRLSTSTKSVQAICQPTDYK
ETCEKSLANAKNINDPKELIKVAFNATINDLSDVIKNSASLIDEAKKDPRTKDALQTCQG
LVDVAIDDLTRSFDKFDKFEVSKIKDYTDDLKTWLSSAITYQETCLDAFENTTGDTGEKM
KKLLKNAGELTSNGLAMVSSFGEVVANLNIPGVNRRLLDAHERMLSDSLKPNVVVAIDGS
GQYKSINEALNAVPKMNTQRYVIFIKAGVYNEHVEIPRKMNNIVFIGEGPTKTKITGSLN
YADGTGTFKTATFAVNGDYFMAKDIGFENTAGPVKHQAVALRVSGDMAIFHNCQIDGYQD
TLYVHSYRQFFRDCTITGTIDFIFGDAAAVFQNCKMIVRKPMDNQACMVTAQGRKDHRGV
GGIVMQNCQIKAEQGFLAAQPPIKAYLGRPWKEFSRTIIMQSEIDGFIAPEGWSPWVGNF
ALDTLFYAEYQNRGPGSITYSRVNWKGYQKTIAPQVAAQFTPGVFIMGDEWVKLSGVPYE
PGMIRV

Transcript Sequence

Gene sequence data has not been registered.